MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Ligilactobacillus murinus 19428wF2_HT12

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from a total of 52 genomes

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PROKKA Genome Annotation:

contigs: 193

bases: 2,276,358 bps

CDS: 2,234

rRNA: 9

Repeat region:

tmRNA: 1

tRNA: 61

misc RNA:

Total features: 2,305

Total number of protein coding genes annotated/found: 2,234

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Items 21 - 40

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Molecule ^	PID/GenBank ID *^	Sequences	Size (NA/AA) ^	Range	Gene Product Name
SEQF5023\|JADGME010000017.1	SEQF5023_00382	NA AA	222/74	138-359	hypothetical protein
SEQF5023\|JADGME010000093.1	SEQF5023_02246	NA AA	576/192	180-755	IS30 family transposase IS1062
SEQF5023\|JADGME010000075.1	SEQF5023_02040	NA AA	456/152	191-646	Urease accessory protein UreE
SEQF5023\|JADGME010000123.1	SEQF5023_00106	NA AA	228/76	206-433	hypothetical protein
SEQF5023\|JADGME010000072.1	SEQF5023_02018	NA AA	321/107	218-538	hypothetical protein
SEQF5023\|JADGME010000048.1	SEQF5023_01518	NA AA	126/42	229-104	hypothetical protein
SEQF5023\|JADGME010000031.1	SEQF5023_01105	NA AA	2163/721	239-2401	ATP-dependent Clp protease ATP-binding subunit ClpE
SEQF5023\|JADGME010000038.1	SEQF5023_01258	NA AA	435/145	239-673	UvrABC system protein A
SEQF5023\|JADGME010000006.1	SEQF5023_01934	NA AA	1617/539	245-1861	Lipid II flippase MurJ
SEQF5023\|JADGME010000083.1	SEQF5023_02147	NA AA	201/67	270-70	hypothetical protein
SEQF5023\|JADGME010000084.1	SEQF5023_02154	NA AA	201/67	270-70	hypothetical protein
SEQF5023\|JADGME010000023.1	SEQF5023_00751	NA AA	1323/441	273-1595	Amino-acid permease RocC
SEQF5023\|JADGME010000037.1	SEQF5023_01241	NA AA	165/55	283-119	23S rRNA (uracil-C(5))-methyltransferase RlmCD
SEQF5023\|JADGME010000109.1	SEQF5023_00009	NA AA	222/74	294-515	hypothetical protein
SEQF5023\|JADGME010000079.1	SEQF5023_02063	NA AA	564/188	309-872	hypothetical protein
SEQF5023\|JADGME010000008.1	SEQF5023_02182	NA AA	378/126	310-687	Virulence protein
SEQF5023\|JADGME010000003.1	SEQF5023_01289	NA AA	594/198	316-909	hypothetical protein
SEQF5023\|JADGME010000005.1	SEQF5023_01747	NA AA	420/140	318-737	hypothetical protein
SEQF5023\|JADGME010000055.1	SEQF5023_01672	NA AA	231/77	326-556	hypothetical protein
SEQF5023\|JADGME010000036.1	SEQF5023_01220	NA AA	159/53	337-179	hypothetical protein

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Page last updated: July 7, 2021 08:39:35